index2bed.py - convert indexed fasta file to bed file¶
- Tags
Python
Purpose¶
Usage¶
Type:
python <script_name>.py --help
for command line help.
Command line options¶
usage: index2bed [-h] [--version] [-g GENOME_FILE]
[--remove-regex REMOVE_REGEX] [-e GFF_FILE]
[-f FIXED_WIDTH_WINDOWS] [--timeit TIMEIT_FILE]
[--timeit-name TIMEIT_NAME] [--timeit-header]
[--random-seed RANDOM_SEED] [-v LOGLEVEL]
[--log-config-filename LOG_CONFIG_FILENAME]
[--tracing {function}] [-? ?] [-I STDIN] [-L STDLOG]
[-E STDERR] [-S STDOUT]
index2bed: error: argument -?: expected one argument