script_template.py¶
- Tags
Python
Purpose¶
Convert the output of a metaphlan analysis to a preferred table format
Usage¶
Example:
python metaphlan2table.py --help
Type:
python metaphlan2table.py --help
for command line help.
Documentation¶
Code¶
usage: metaphlan2table [-h] [--version] [-t {read_map,rel_ab}]
[--timeit TIMEIT_FILE] [--timeit-name TIMEIT_NAME]
[--timeit-header] [--random-seed RANDOM_SEED]
[-v LOGLEVEL]
[--log-config-filename LOG_CONFIG_FILENAME]
[--tracing {function}] [-? ?] [-I STDIN] [-L STDLOG]
[-E STDERR] [-S STDOUT]
metaphlan2table: error: argument -?: expected one argument